8RGD
High pH (8.0) nitrite-bound MSOX movie series dataset 15 of the copper nitrite reductase from Bradyrhizobium sp. ORS375 (two-domain) [10.2 MGy]
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.775 |
Spacegroup name | P 21 3 |
Unit cell lengths | 107.330, 107.330, 107.330 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.710 |
R-factor | 0.15757 |
Rwork | 0.156 |
R-free | 0.18904 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.782 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.000 | 1.740 |
High resolution limit [Å] | 1.710 | 1.710 |
Rpim | 0.047 | |
Number of reflections | 44718 | 2338 |
<I/σ(I)> | 11.7 | 0.8 |
Completeness [%] | 100.0 | 100 |
Redundancy | 19.8 | |
CC(1/2) | 0.999 | 0.293 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 0.05 M HEPES pH 5.5, 1.8 M Ammonium Sulphate |