8RAK
Crystal structure of human Dihydroorotate Dehydrogenase in complex with the inhibitor 2-Hydroxy-N-(2-isopropyl-5-methyl-4-(pyridin-4-yloxy)phenyl)pyrazolo[1,5-a]pyridine-3-carboxamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 93.15 |
Detector technology | PIXEL |
Collection date | 2022-01-27 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.8731 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 91.474, 91.474, 124.032 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.610 - 1.850 |
R-factor | 0.1655 |
Rwork | 0.164 |
R-free | 0.18610 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 0.929 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.830 | 1.950 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.126 | 0.726 |
Number of reflections | 51817 | 7488 |
<I/σ(I)> | 9 | |
Completeness [%] | 100.0 | |
Redundancy | 6.6 | |
CC(1/2) | 0.996 | 0.743 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 2M ammonium sulphate, 100 mM sodium acetate pH 4.8, and 30 % v/v glycerol |