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8R5R

Structure of apo TDO with a bound inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-10-09
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.00
Spacegroup nameP 21 21 21
Unit cell lengths91.738, 132.906, 137.495
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.830 - 3.078
R-factor0.228
Rwork0.227
R-free0.25190
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.820
Data reduction softwareautoPROC
Data scaling softwareautoPROC
Phasing softwarePHASER
Refinement softwareBUSTER (2.11.8)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]76.3103.240
High resolution limit [Å]3.0803.080
Rmerge0.171
Rpim0.056
Number of reflections277161386
<I/σ(I)>9.81.3
Completeness [%]95.260.6
Redundancy9.88.6
CC(1/2)0.9980.536
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52935.3 mg/ml (124 uM) protein containing 2 mM AMT and 1 mM inhibitor Reservoir solution: Morpheus II condition F8 5%(w/v) PEG 20K, 25%(w/v) 1,1,1-tris(hydroxymethyl)propane, 1%(w/v) NDSB 195,0.02M of each Monosaccharide II, 0.1M BES/TEA pH 7.5

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PDB entries from 2024-05-15

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