8PF0
Diubiquitin-derived artificial binding protein (Affilin) variant Af1 specific to oncofetal fibronectin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.2 |
| Synchrotron site | BESSY |
| Beamline | 14.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-05-28 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.9184 |
| Spacegroup name | P 41 |
| Unit cell lengths | 62.767, 62.767, 67.841 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 19.050 - 2.200 |
| R-factor | 0.195 |
| Rwork | 0.193 |
| R-free | 0.22610 |
| Structure solution method | SAD |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.089 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | SHARP |
| Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 20.000 | 20.000 | 2.300 |
| High resolution limit [Å] | 2.200 | 10.000 | 2.200 |
| Rmerge | 0.031 | 0.033 | 0.387 |
| Rmeas | 0.036 | 0.038 | 0.451 |
| Number of reflections | 26176 | 240 | 3189 |
| <I/σ(I)> | 22.88 | ||
| Completeness [%] | 99.5 | ||
| Redundancy | 3.8 | ||
| CC(1/2) | 0.999 | 0.997 | 0.910 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 288 | 100 mM Imidazol/MES, 60 mM calcium/magnesium chloride, 30% PEG 8000/ethylene glycol (w/v), 10 mM copper(II)chloride dehydrate |






