8OEP
Crystal structure of the PTPN3 PDZ domain bound to the HPV18 E6 oncoprotein C-terminal peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9786 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 82.230, 82.230, 139.200 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 31.700 - 1.870 |
R-factor | 0.2008 |
Rwork | 0.198 |
R-free | 0.24880 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.933 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.700 | 2.175 |
High resolution limit [Å] | 1.870 | 2.100 |
Number of reflections | 23304 | 1630 |
<I/σ(I)> | 23.94 | |
Completeness [%] | 99.2 | |
Redundancy | 12.3 | |
CC(1/2) | 0.999 | 0.973 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.15 | 20% w/v PEG 3350, 0.2 M NaI at pH 7; |