8HHP
Crystal structure of PPARg-LBD complexed with three partial agonists, one nTZDpa and two LT175
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
| Synchrotron site | Photon Factory |
| Beamline | AR-NW12A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-05-11 |
| Detector | ADSC QUANTUM 270 |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 60.500, 60.500, 162.260 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.500 - 2.450 |
| R-factor | 0.2211 |
| Rwork | 0.214 |
| R-free | 0.28640 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2vv3 |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.254 |
| Data reduction software | iMOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.500 | 2.570 |
| High resolution limit [Å] | 2.450 | 2.450 |
| Number of reflections | 11599 | 11599 |
| <I/σ(I)> | 18 | |
| Completeness [%] | 99.2 | |
| Redundancy | 6.4 | |
| CC(1/2) | 0.998 | 0.948 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.7 | 293 | 0.1 M Tris-HCl pH 7.7, 0.75 M sodium citrate |






