8G4V
Horse liver alcohol dehydrogense His-51-Gln form complexed with NAD+ and 2,3,4,5,6-pentafluorobenzyl alcohol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-07-24 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 |
Unit cell lengths | 44.170, 51.590, 92.770 |
Unit cell angles | 92.02, 102.89, 110.04 |
Refinement procedure
Resolution | 19.960 - 1.200 |
R-factor | 0.13518 |
Rwork | 0.135 |
R-free | 0.16070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dwv |
RMSD bond length | 0.020 |
RMSD bond angle | 2.256 |
Data reduction software | d*TREK |
Data scaling software | d*TREK (9.9.9.8L) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.960 | 19.960 | 1.240 |
High resolution limit [Å] | 1.200 | 2.580 | 1.200 |
Rmerge | 0.060 | 0.041 | 0.181 |
Rmeas | 0.065 | 0.044 | 0.212 |
Total number of observations | 1316799 | 186067 | 60919 |
Number of reflections | 211946 | 21940 | 17221 |
<I/σ(I)> | 13.3 | 28.4 | 4.2 |
Completeness [%] | 91.1 | ||
Redundancy | 6.13 | 8.23 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICRODIALYSIS | 7 | 278 | 10 mg/ml protein in 50 mM ammonium N-[tris(hydroxymethyl)methyl]-2-aminoethanesulfate buffer with 0.25 mM EDTA, 2 mM NAD+ and 15 mM 2,3,4,5,6-pentafluorobenzyl alcohol, crystals formed at ~13 % 2-methyl-2,4-pentanediol, raised to 25% MPD before crystal pliunged into liquid N2. |