8FBH
Crystal structure of NSD1 Mutant-T1927A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 66.293, 67.382, 70.025 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.170 - 2.320 |
R-factor | 0.1908 |
Rwork | 0.188 |
R-free | 0.23130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ooi |
RMSD bond length | 0.009 |
RMSD bond angle | 1.400 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.360 |
High resolution limit [Å] | 2.320 | 6.290 | 2.320 |
Rmerge | 0.111 | 0.054 | 0.937 |
Rmeas | 0.119 | 0.057 | 1.035 |
Rpim | 0.042 | 0.020 | 0.428 |
Total number of observations | 110550 | ||
Number of reflections | 13958 | 782 | 695 |
<I/σ(I)> | 8.2 | ||
Completeness [%] | 99.8 | 98.7 | 99.7 |
Redundancy | 7.9 | 7.6 | 5.7 |
CC(1/2) | 0.998 | 0.589 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 2.1M NH4SO4, 0.2M NaCl, 0.1M Hepes pH |