8FBG
Crystal structure of NSD1 Mutant-Y1869C
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-06-12 |
Detector | RIGAKU SATURN A200 |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.449, 64.947, 81.408 |
Unit cell angles | 90.00, 93.17, 90.00 |
Refinement procedure
Resolution | 27.090 - 2.290 |
R-factor | 0.217 |
Rwork | 0.214 |
R-free | 0.27100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ooi |
RMSD bond length | 0.010 |
RMSD bond angle | 1.090 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.8.3) |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.290 | 6.240 | 2.300 |
Rmerge | 0.113 | 0.068 | 0.771 |
Rmeas | 0.128 | 0.077 | 0.881 |
Rpim | 0.061 | 0.035 | 0.419 |
Number of reflections | 19253 | 1027 | 975 |
<I/σ(I)> | 10.8 | ||
Completeness [%] | 96.7 | 98.6 | 96.8 |
Redundancy | 4.1 | 4.1 | 4 |
CC(1/2) | 0.995 | 0.897 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 20% p3350, 0.2M KCl |