8F0M
Monobody 12D5 bound to KRAS(G12D)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-ID |
| Synchrotron site | APS |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-09-24 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97918 |
| Spacegroup name | P 21 2 21 |
| Unit cell lengths | 151.386, 44.733, 88.162 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 42.900 - 2.440 |
| R-factor | 0.2031 |
| Rwork | 0.201 |
| R-free | 0.24500 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | PDB entries 7L0G & 5VPZ |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.660 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.19.2_4158: 000)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.480 |
| High resolution limit [Å] | 2.440 | 2.440 |
| Rmerge | 0.091 | 0.308 |
| Rmeas | 0.110 | 0.373 |
| Rpim | 0.061 | 0.207 |
| Number of reflections | 23370 | 1168 |
| <I/σ(I)> | 12.4 | 5 |
| Completeness [%] | 98.4 | 99.7 |
| Redundancy | 3.3 | 3.2 |
| CC(1/2) | 0.939 | 0.905 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2 M sodium sulfate decahydrate, 20% w/v PEG3350, 0.05% w/v benzamidine hydrochloride |






