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8EUS

Crystal structure of NPC1 luminal domain C

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2018-08-06
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.000
Spacegroup nameP 1 21 1
Unit cell lengths53.145, 65.207, 68.534
Unit cell angles90.00, 91.69, 90.00
Refinement procedure
Resolution41.190 - 2.300
R-factor0.1927
Rwork0.191
R-free0.22880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5f18
RMSD bond length0.003
RMSD bond angle0.646
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareREFMAC
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.370
High resolution limit [Å]2.3002.300
Rmerge0.1200.600
Rmeas0.1300.680
Rpim0.0530.300
Number of reflections204211522
<I/σ(I)>13.13.1
Completeness [%]98.197.4
Redundancy5.54.8
CC(1/2)0.9980.772
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP62930.1 M sodium malonate 20% PEG 3,350

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