8EDE
Crystal structure of covalent inhibitor 2-chloro-N'-(N-(4-chlorophenyl)-N-methylglycyl)acetohydrazide bound to Ubiquitin C-terminal Hydrolase-L1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-2 |
| Synchrotron site | SSRL |
| Beamline | BL12-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-05-20 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.98 |
| Spacegroup name | P 4 21 2 |
| Unit cell lengths | 110.003, 110.003, 79.609 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.252 - 1.799 |
| R-factor | 0.1946 |
| Rwork | 0.193 |
| R-free | 0.22670 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2etl |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.834 |
| Data reduction software | DENZO (721.3) |
| Data scaling software | SCALEPACK (721.3) |
| Phasing software | MOLREP (1.12_2829) |
| Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.860 |
| High resolution limit [Å] | 1.799 | 3.880 | 1.800 |
| Rmerge | 0.147 | 0.071 | 2.229 |
| Rmeas | 0.153 | 0.074 | 2.322 |
| Rpim | 0.043 | 0.021 | 0.647 |
| Number of reflections | 45890 | 4890 | 4521 |
| <I/σ(I)> | 5.8 | ||
| Completeness [%] | 100.0 | 99.9 | 100 |
| Redundancy | 12.7 | 12.2 | 12.9 |
| CC(1/2) | 0.998 | 0.617 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 294.15 | 0.1M tri-Sodium citrate 2.4M Ammonium sulfate |






