Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8E7A

Crystal structure of the p53 (Y107H) core domain orthorhombic P form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 19-ID
Synchrotron siteNSLS-II
Beamline19-ID
Temperature [K]291
Detector technologyPIXEL
Collection date2022-06-06
DetectorDECTRIS EIGER2 XE 9M
Wavelength(s)0.9786
Spacegroup nameP 21 21 2
Unit cell lengths51.140, 109.484, 33.865
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.370 - 1.300
R-factor0.1465
Rwork0.145
R-free0.17420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1tsr
Data reduction softwareXDS
Data scaling softwareAimless (0.7.8)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.33046.3301.320
High resolution limit [Å]1.3007.0001.300
Rmerge0.0770.0331.283
Total number of observations330751213016930
Number of reflections475953782339
<I/σ(I)>11.836.21.5
Completeness [%]99.79998.7
Redundancy6.95.67.2
CC(1/2)0.9990.9990.605
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29130 % (w/v) PEG 2000 MME, 100 mM potassium thiocyanate

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon