8DRV
Product structure of SARS-CoV-2 Mpro C145A mutant in complex with nsp8-nsp9 (C8) cut site sequence
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.033 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 85.788, 117.202, 121.381 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.690 - 2.400 |
R-factor | 0.1808 |
Rwork | 0.178 |
R-free | 0.23980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7joy |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 60.690 | 49.550 | 2.260 |
High resolution limit [Å] | 2.200 | 9.840 | 2.200 |
Rmerge | 0.181 | 0.047 | 2.852 |
Total number of observations | 9175 | 51555 | |
Number of reflections | 62720 | 806 | 4546 |
<I/σ(I)> | 9.9 | 38.1 | 1 |
Completeness [%] | 99.9 | 99.3 | 99.6 |
Redundancy | 12.5 | 11.4 | 11.3 |
CC(1/2) | 0.998 | 0.999 | 0.384 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1M Tris pH 8.5, 20% PEG 3350 |