8DOC
Crystal structure of RPE65 in complex with compound 16e and palmitate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-03-07 |
Detector | ADSC HF-4M |
Wavelength(s) | 0.979100 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 176.820, 176.820, 86.190 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.050 - 2.100 |
R-factor | 0.1793 |
Rwork | 0.178 |
R-free | 0.21110 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4ryx |
RMSD bond length | 0.004 |
RMSD bond angle | 1.073 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.230 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.176 | 2.338 |
Number of reflections | 46592 | 7529 |
<I/σ(I)> | 10.33 | 1.09 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 12.7 | |
CC(1/2) | 0.998 | 0.399 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 10.5 | 281 | 30% PEG 400, 100 mM CAPS, pH 10.5, 500 mM ammonium sulfate, 10% v/v |