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8DH2

T7 RNA polymerase elongation complex with unnatural base dDs-ATP mismatch

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.3
Synchrotron siteALS
Beamline5.0.3
Temperature [K]100
Detector technologyCCD
Collection date2022-04-21
DetectorADSC QUANTUM 315r
Wavelength(s)1
Spacegroup nameP 1
Unit cell lengths78.702, 85.047, 200.477
Unit cell angles89.87, 85.38, 69.51
Refinement procedure
Resolution47.370 - 2.900
R-factor0.2609
Rwork0.260
R-free0.30750
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)8dh0
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHENIX (1.19)
Refinement softwarePHENIX (1.19)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.55048.5502.940
High resolution limit [Å]2.89015.8302.890
Rmerge0.1390.0222.003
Rmeas0.1640.0252.370
Rpim0.0870.0131.251
Total number of observations376957233618952
Number of reflections1068916325354
<I/σ(I)>5.531.80.5
Completeness [%]98.395.598
Redundancy3.53.73.5
CC(1/2)0.9950.9990.273
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.129810% PEG 8000, 8% glycerol, 5 mM B-mercaptoethanol, 100 mM Tris pH 8.1

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PDB entries from 2024-05-15

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