8DD6
SARS-CoV-2 Main Protease (Mpro) H163A Mutant in Complex with GC376
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.1271 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 44.921, 52.836, 111.737 |
Unit cell angles | 90.00, 100.30, 90.00 |
Refinement procedure
Resolution | 54.970 - 2.300 |
R-factor | 0.1997 |
Rwork | 0.197 |
R-free | 0.25040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7alh |
RMSD bond length | 0.002 |
RMSD bond angle | 0.487 |
Data reduction software | DIALS (2.2) |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.990 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.175 | 0.895 |
Rmeas | 0.191 | 0.971 |
Rpim | 0.075 | 0.374 |
Number of reflections | 11561 | 558 |
<I/σ(I)> | 5.8 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.4 | 6.72 |
CC(1/2) | 0.991 | 0.814 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1M Bis-Tris, pH 6.5, 25% (w/v) PEG 3350, and 3% (v/v) DMSO |