Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8DC0

Rat Betaglycan Zona Pellucida Domain (ZPC) in complex with mini monomer TGFb2 (mmTGF-b2-7M2R)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2022-02-16
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97918
Spacegroup nameI 2 2 2
Unit cell lengths76.456, 90.453, 98.872
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution66.740 - 1.930
R-factor0.2215
Rwork0.219
R-free0.25660
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB entries 3QW9 & 5TX4
RMSD bond length0.006
RMSD bond angle0.915
Data reduction softwareautoPROC
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.20_4459)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]66.7401.999
High resolution limit [Å]1.9301.930
Rmerge0.179
Rmeas0.186
Number of reflections261312560
<I/σ(I)>9.27
Completeness [%]99.8
Redundancy13
CC(1/2)0.9970.404
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.629813% PEG4000, 0.1 M trisodium citrate, 10% ethylene glycol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon