8D59
Crystal structure of human METTL1 in complex with SAM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9789 |
Spacegroup name | P 61 |
Unit cell lengths | 86.026, 86.026, 65.579 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 37.250 - 2.260 |
R-factor | 0.2083 |
Rwork | 0.207 |
R-free | 0.22950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ckk |
RMSD bond length | 0.002 |
RMSD bond angle | 0.546 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.250 | 2.290 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.292 | 1.890 |
Rpim | 0.070 | 0.797 |
Number of reflections | 12936 | 579 |
<I/σ(I)> | 13.5 | 1.2 |
Completeness [%] | 99.2 | 91.6 |
Redundancy | 15.5 | 5.7 |
CC(1/2) | 0.983 | 0.414 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.7 | 295.15 | 50 mM Sodium cacodylate pH 5.7, 1.5 M Lithium sulfate, 10 mM Magnesium sulfate |