Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8CT5

Catalytic Core Domain of HIV-1 Integrase (F185K)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-10-13
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.92
Spacegroup nameP 31 2 1
Unit cell lengths72.973, 72.973, 66.097
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.300 - 1.970
R-factor0.20435
Rwork0.201
R-free0.23648
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3l3u
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.3002.044
High resolution limit [Å]1.9701.970
Rmerge0.0180.151
Rmeas0.0260.213
Rpim0.0180.151
Number of reflections146611422
<I/σ(I)>27.33.6
Completeness [%]99.898.8
Redundancy22
CC(1/2)0.9990.942
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5293.157% PEG 8000, 0.2 M ammonium sulfate, 0.1 M sodium cacodylate, pH 6.5, 5 mM manganese chloride, 5 mM magnesium chloride, and 5 mM DTT

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon