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8CPR

G13D mutant of KRAS4b (2-169) bound to GDP with the switch-I in fully open conformation crystallized in sodium potassium phosphate buffer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX IV BEAMLINE BioMAX
Synchrotron siteMAX IV
BeamlineBioMAX
Temperature [K]293
Detector technologyPIXEL
Collection date2022-10-22
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.976254
Spacegroup nameP 3 2 1
Unit cell lengths76.413, 76.413, 55.862
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution42.720 - 2.000
R-factor0.18288
Rwork0.179
R-free0.24809
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.453
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0352)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.6862.146
High resolution limit [Å]2.0012.001
Rmerge0.1721.155
Rmeas0.1821.222
Rpim0.0590.394
Number of reflections9569478
<I/σ(I)>8.62.1
Completeness [%]73.3
Redundancy9.7
CC(1/2)0.9990.775
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2931.4 M Na/K Phosphate pH around 8.8 OR 0.9 M Na/K Phosphate pH 9.1 (sodium potassium phosphate), 0.5 M Na/K Phosphate pH 8.3

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PDB entries from 2024-10-09

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