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8BBY

VarB H/L (SLPL/SLPH) complex from C. difficile SlpA (R20291 strain)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2022-05-04
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.708459
Spacegroup nameC 1 2 1
Unit cell lengths108.926, 131.291, 138.269
Unit cell angles90.00, 108.78, 90.00
Refinement procedure
Resolution36.230 - 2.900
R-factor0.2459
Rwork0.244
R-free0.28690
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7acz
Data reduction softwareDIALS
Data scaling softwarepointless
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.2303.000
High resolution limit [Å]2.9002.900
Rpim0.0860.404
Number of reflections401293584
<I/σ(I)>82.19
Completeness [%]97.886.49
Redundancy2
CC(1/2)0.9780.526
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293.150.03 M Magnesium chloride hexahydrate; 0.03 M Calcium chloride dihydrate, 0.12 M Ethyleneglycol, 0.05 M Tris (base); 0.05 M BICINE pH 8.5, 20% v/v Glycerol; 10% w/v PEG 4,000

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PDB entries from 2024-05-15

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