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8BA5

Crystal structure of the DNMT3A ADD domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.2
Synchrotron siteBESSY
Beamline14.2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-10-06
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.9184
Spacegroup nameP 61 2 2
Unit cell lengths57.800, 57.800, 138.560
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution22.000 - 1.450
R-factor0.1876
Rwork0.187
R-free0.21290
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3a1a
RMSD bond length0.005
RMSD bond angle0.805
Data reduction softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.0801.540
High resolution limit [Å]1.4501.450
Number of reflections459787353
<I/σ(I)>17.621.24
Completeness [%]99.899.1
Redundancy20.720.86
CC(1/2)1.0000.670
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION291.1517 % PEG 8000, 0.2 M Magnesiumsulfat, 0.1 M TRIS-HCl pH 7.5

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