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8BA5

Crystal structure of the DNMT3A ADD domain

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA (cytosine-5)-methyltransferase 3Apolymer14416311.71UniProt (Q9Y6K1)
Pfam (PF17980)
Pfam (PF21255)
Homo sapiens (human)Dnmt3a,Cysteine methyltransferase DNMT3A,DNA methyltransferase HsaIIIA,DNA MTase HsaIIIA,M.HsaIIIA
2B, C
(A)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
3D, E, F
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
4G
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
5H
(A)
waterwater18.0118Chemie (HOH)
Sequence modifications
A: 476 - 614 (UniProt: Q9Y6K1)
PDBExternal DatabaseDetails
Gly 471-expression tag
Pro 472-expression tag
Leu 473-expression tag
Gly 474-expression tag
Ser 475-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight16311.7
Non-Polymers*Number of molecules6
Total formula weight344.7
All*Total formula weight16656.4
*Water molecules are not included.

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PDB entries from 2025-06-25

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