Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8B07

Crystal structure of monkeypox virus methyltransferase VP39 in complex with sinefungin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-09-02
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9184
Spacegroup nameP 21 21 21
Unit cell lengths51.891, 84.427, 153.755
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.170 - 2.050
R-factor0.2096
Rwork0.208
R-free0.23270
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1vp3
RMSD bond length0.003
RMSD bond angle0.519
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20_4459)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.1702.125
High resolution limit [Å]2.0502.050
Rmerge0.2732.276
Rmeas0.2842.366
Rpim0.0780.640
Number of reflections431384205
<I/σ(I)>9.821.1
Completeness [%]99.898.52
Redundancy13.113.4
CC(1/2)0.9960.448
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291200 mM lithium citrate, 14.5% (w/v) PEG 3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon