8A23
Crystal structure of SARS-CoV-2 nsp10/nsp16 methyltransferase in complex with TO383
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-12-09 |
| Detector | DECTRIS PILATUS 200K |
| Wavelength(s) | 1.541870 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 85.142, 85.142, 162.874 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.780 - 2.800 |
| R-factor | 0.2341 |
| Rwork | 0.233 |
| R-free | 0.25580 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6yz1 |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.461 |
| Data reduction software | XDS (xdsgui2) |
| Data scaling software | XDS (xdsgui2) |
| Phasing software | PHASER (2.8.3) |
| Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.780 | 2.900 |
| High resolution limit [Å] | 2.800 | 2.800 |
| Rmerge | 0.448 | 3.698 |
| Rmeas | 0.468 | 3.859 |
| Rpim | 0.134 | 1.087 |
| Number of reflections | 15396 | 1499 |
| <I/σ(I)> | 6.07 | 0.55 |
| Completeness [%] | 99.7 | 99.87 |
| Redundancy | 12 | 12 |
| CC(1/2) | 0.984 | 0.303 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2 M ammonium sulfate, 0.1 M sodium acetate pH 5.5, 10 % w/v PEG 2000 MME |






