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8A23

Crystal structure of SARS-CoV-2 nsp10/nsp16 methyltransferase in complex with TO383

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2021-12-09
DetectorDECTRIS PILATUS 200K
Wavelength(s)1.541870
Spacegroup nameP 41 21 2
Unit cell lengths85.142, 85.142, 162.874
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.780 - 2.800
R-factor0.2341
Rwork0.233
R-free0.25580
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6yz1
RMSD bond length0.002
RMSD bond angle0.461
Data reduction softwareXDS (xdsgui2)
Data scaling softwareXDS (xdsgui2)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20_4459)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.7802.900
High resolution limit [Å]2.8002.800
Rmerge0.4483.698
Rmeas0.4683.859
Rpim0.1341.087
Number of reflections153961499
<I/σ(I)>6.070.55
Completeness [%]99.799.87
Redundancy1212
CC(1/2)0.9840.303
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.2 M ammonium sulfate, 0.1 M sodium acetate pH 5.5, 10 % w/v PEG 2000 MME

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