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7ZF7

SARS-CoV-2 Omicron BA.2 RBD in complex with ACE2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2022-02-07
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9762
Spacegroup nameP 41 21 2
Unit cell lengths104.152, 104.152, 223.701
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution76.220 - 3.460
R-factor0.259
Rwork0.258
R-free0.26900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7nxc
RMSD bond length0.002
RMSD bond angle0.446
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]77.0003.520
High resolution limit [Å]3.4603.460
Rmerge0.703
Number of reflections16805829
<I/σ(I)>3.10.3
Completeness [%]99.6
Redundancy26.4
CC(1/2)0.9920.317
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.09 M MES monohydrate pH 6.0, 18% (w/v) PEG monomethyl ether 2000

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PDB entries from 2024-07-10

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