7Z5A
Crystal structure of the trapped complex of mouse Endonuclease VIII-LIKE 3 (mNEIL3) and hairpin DNA with 5'overhang
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.117, 71.528, 94.437 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.130 - 2.280 |
R-factor | 0.238 |
Rwork | 0.237 |
R-free | 0.24830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3w0f |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.130 | 2.341 |
High resolution limit [Å] | 2.260 | 2.260 |
Rmerge | 0.190 | 0.320 |
Rmeas | 0.201 | |
Number of reflections | 179306 | 1800 |
<I/σ(I)> | 9.11 | |
Completeness [%] | 100.0 | |
Redundancy | 5.89 | |
CC(1/2) | 0.992 | 0.957 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 50 mM PIPES pH = 7.5 4% (w/v) PEG 8000 20 mM MgCl2 1 mM Spermine |