7Z4M
Plasmodium falciparum pyruvate kinase complexed with Mg2+ and K+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 89.200, 109.670, 134.140 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.740 - 1.900 |
R-factor | 0.2055 |
Rwork | 0.203 |
R-free | 0.24170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3khd |
RMSD bond length | 0.005 |
RMSD bond angle | 0.745 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.740 | 1.968 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.051 | |
Rpim | 0.024 | 0.638 |
Number of reflections | 51642 | 5122 |
<I/σ(I)> | 15.09 | |
Completeness [%] | 99.1 | |
Redundancy | 5.3 | |
CC(1/2) | 0.999 | 0.389 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 100 mM MES, pH 6.5, 50 mM KCl, 10 mM MgCl2, 14-24% PEG 600 |