7Z2W
Escherichia coli periplasmic phytase AppA D304A,T305E mutant, complex with myo-inositol hexakissulfate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9762 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.630, 47.450, 65.520 |
Unit cell angles | 90.00, 100.52, 90.00 |
Refinement procedure
Resolution | 41.270 - 1.420 |
R-factor | 0.1544 |
Rwork | 0.153 |
R-free | 0.18770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dkl |
RMSD bond length | 0.006 |
RMSD bond angle | 0.916 |
Data reduction software | xia2 |
Data scaling software | pointless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.270 | 1.471 |
High resolution limit [Å] | 1.420 | 1.420 |
Rpim | 0.044 | 0.561 |
Number of reflections | 71315 | 7086 |
<I/σ(I)> | 9.99 | 1.42 |
Completeness [%] | 98.1 | |
Redundancy | 3.3 | |
CC(1/2) | 0.998 | 0.488 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | 100 mM MES pH 6.5, 18 % w/v PEG 8000, 200 mM calcium acetate. Soaked in 20 % w/v PEG 3350, 9 mM IHS in 0.6 M glycine pH 3.0, 20 % glycerol. |