7Z1I
Plant myrosinase TGG1 from Arabidopsis thaliana
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-29 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 1 |
Unit cell lengths | 70.989, 88.989, 120.982 |
Unit cell angles | 108.79, 92.87, 102.97 |
Refinement procedure
Resolution | 55.520 - 3.090 |
R-factor | 0.3181 |
Rwork | 0.317 |
R-free | 0.34070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1myr |
RMSD bond length | 0.002 |
RMSD bond angle | 0.441 |
Data reduction software | xia2 (0.6.475) |
Data scaling software | Aimless |
Phasing software | PHASER (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.510 | 3.200 |
High resolution limit [Å] | 3.090 | 3.090 |
Rmerge | 0.115 | |
Rmeas | 0.163 | |
Rpim | 0.115 | |
Number of reflections | 48606 | 4282 |
<I/σ(I)> | 5.2 | |
Completeness [%] | 98.4 | 93.7 |
Redundancy | 3.4 | 3.5 |
CC(1/2) | 0.936 | 0.770 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291.15 | 100 mM Bis-Tris pH 7.0 300 mM NaCl 30% w/v polyethylene glycol 3,350 |