7YVD
The crystal structure of the progerin C-terminal peptide and the Ig-like domain of lamin A/C
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 5C (4A) |
| Synchrotron site | PAL/PLS |
| Beamline | 5C (4A) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-07-14 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.97926 |
| Spacegroup name | P 64 2 2 |
| Unit cell lengths | 91.974, 91.974, 204.562 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 34.390 - 2.100 |
| R-factor | 0.1659 |
| Rwork | 0.164 |
| R-free | 0.19540 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7crg |
| RMSD bond angle | 4.885 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | MOLREP |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.140 |
| High resolution limit [Å] | 2.100 | 5.700 | 2.100 |
| Rmerge | 0.063 | 0.032 | 0.213 |
| Rmeas | 0.064 | 0.033 | 0.218 |
| Rpim | 0.011 | 0.005 | 0.044 |
| Number of reflections | 56656 | 1749 | 1487 |
| <I/σ(I)> | 16.9 | ||
| Completeness [%] | 99.7 | 98.8 | 99.7 |
| Redundancy | 28.7 | 35.1 | 22.5 |
| CC(1/2) | 1.000 | 0.993 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 6.5 | 287 | 0.1 M BIS-TRIS pH 6.5, 25% (v/v) Polyethylene glycol 300 |






