Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7YPZ

Zafirlukast in complex with CRM1-Ran-RanBP1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNFPSS BEAMLINE BL18U
Synchrotron siteNFPSS
BeamlineBL18U
Temperature [K]100
Detector technologyCCD
Collection date2019-12-12
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.9792
Spacegroup nameP 43 21 2
Unit cell lengths105.782, 105.782, 304.905
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.010 - 2.150
R-factor0.18463
Rwork0.183
R-free0.21644
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7cnd
RMSD bond length0.006
RMSD bond angle1.310
Data reduction softwareHKL-2000
Data scaling softwareAimless (0.7.4)
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]304.900304.9002.260
High resolution limit [Å]2.1506.7902.150
Rmerge0.1010.0501.393
Rmeas0.1030.0511.431
Rpim0.0210.0110.325
Total number of observations234114972757242158
Number of reflections94712338413045
<I/σ(I)>23.2562.6
Completeness [%]99.299.995.3
Redundancy24.721.518.6
CC(1/2)0.9990.9990.797
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.12 M Monosaccharides (20 mM D-Glucose; 20 mM D-Mannose; 20 mM D-Galactose; 20 mM L-Fucose; 20 mM D-Xylose; 20 mM N-Acetyl-D-Glucosamine), 0.1 M buffer system 1 pH 6.5 (sodium HEPES and MOPS), and 50 % Precipitant Mix 2 (40% v/v Ethylene glycol; 20 % w/v PEG 8000)

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon