7YC9
Co-crystal structure of BTK kinase domain with inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL45XU |
Synchrotron site | SPring-8 |
Beamline | BL45XU |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2022-04-23 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.232, 58.177, 95.258 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.470 - 1.400 |
R-factor | 0.1667 |
Rwork | 0.166 |
R-free | 0.18740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6j6m |
RMSD bond length | 0.006 |
RMSD bond angle | 0.891 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.630 | 1.430 |
High resolution limit [Å] | 1.400 | 1.400 |
Number of reflections | 58704 | 3040 |
<I/σ(I)> | 16.1 | |
Completeness [%] | 99.5 | |
Redundancy | 4.3 | |
CC(1/2) | 0.998 | 0.950 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.1M Sodium cacodylate trihydrate pH 7.0, 0.2M Ammonium sulfate, 26% PEG8000 |