7YBR
Crystal structure of human transthyretin variant A97S complexed with Tolcapone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-05-19 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 84.925, 42.929, 64.841 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.870 - 1.710 |
R-factor | 0.1796 |
Rwork | 0.177 |
R-free | 0.21940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qgb |
RMSD bond length | 0.007 |
RMSD bond angle | 0.955 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.18.2_3874) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.770 |
High resolution limit [Å] | 1.710 | 1.710 |
Rmerge | 0.042 | 0.367 |
Rmeas | 0.049 | 0.425 |
Rpim | 0.024 | 0.211 |
Number of reflections | 31836 | 2555 |
<I/σ(I)> | 31.57377 | 3 |
Completeness [%] | 99.5 | 99 |
Redundancy | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 20% PEG 400, 200 mM Calcium Chloride, 100 mM HEPES |