7Y8J
3D1 in complex with 6-mer HR1 peptide from SARS-CoV-2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2021-11-06 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9785 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 36.965, 69.810, 51.058 |
Unit cell angles | 90.00, 110.46, 90.00 |
Refinement procedure
Resolution | 24.590 - 1.030 |
R-factor | 0.1338 |
Rwork | 0.134 |
R-free | 0.14460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6kvf |
Data reduction software | HKL-2000 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.810 | 1.090 |
High resolution limit [Å] | 1.030 | 1.030 |
Number of reflections | 85307 | 3761 |
<I/σ(I)> | 17.4 | |
Completeness [%] | 98.1 | |
Redundancy | 3.4 | |
CC(1/2) | 0.999 | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 0.1 M HEPES pH7.5, 25% PEG8000 |