7XAF
The crystal structure of TrkA kinase in complex with 4^6,14-dimethyl-N-(3-(4-methyl-1H-imidazol-1-yl)-5-(trifluoromethyl)phenyl)-10-oxo-5-oxa-11,14-diaza-1(3,6)-imidazo[1,2-b]pyridazina-4(1,3)-benzenacyclo- tetradecaphan-2-yne-45-carboxamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-D |
Temperature [K] | 104.5 |
Detector technology | PIXEL |
Collection date | 2022-01-04 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.5418 |
Spacegroup name | P 31 1 2 |
Unit cell lengths | 52.116, 52.116, 228.483 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.414 - 3.001 |
R-factor | 0.249636509057 |
Rwork | 0.244 |
R-free | 0.29897 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5h3q |
RMSD bond length | 0.003 |
RMSD bond angle | 0.826 |
Data reduction software | CrysalisPro |
Data scaling software | CrysalisPro (1.9_1692+SVN) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692+SVN) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.420 | 3.210 |
High resolution limit [Å] | 3.000 | 3.000 |
Number of reflections | 7315 | 2270 |
<I/σ(I)> | 4.5 | |
Completeness [%] | 100.0 | |
Redundancy | 4.7 | |
CC(1/2) | 0.888 | 0.408 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 289 | 0.1M Na2HPO4/KH2PO4 (pH 6.2), 2M NaCl |