7X9G
Crystal structure of human EDA and EDAR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-04 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97853 |
Spacegroup name | H 3 |
Unit cell lengths | 87.169, 87.169, 156.354 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.710 - 2.800 |
R-factor | 0.2493 |
Rwork | 0.248 |
R-free | 0.28200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rj7 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.900 |
High resolution limit [Å] | 2.800 | 6.030 | 2.800 |
Rmerge | 0.044 | 0.034 | 0.696 |
Rmeas | 0.052 | 0.041 | 0.824 |
Rpim | 0.027 | 0.021 | 0.437 |
Total number of observations | 37897 | ||
Number of reflections | 10861 | 1087 | 1123 |
<I/σ(I)> | 11.4 | ||
Completeness [%] | 99.8 | 99.6 | 99.8 |
Redundancy | 3.5 | 3.4 | 3.4 |
CC(1/2) | 0.997 | 0.633 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 277 | 0.1M Bicine, pH9.0, 25% PEG 6000 |