7WUE
Crystal structure of SARS-CoV-2 Receptor Binding Domain in complex with the monoclonal antibody m31A7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL15A1 |
Synchrotron site | NSRRC |
Beamline | BL15A1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-12-08 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 1.0 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 110.460, 258.120, 141.060 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.610 - 3.200 |
R-factor | 0.2316 |
Rwork | 0.228 |
R-free | 0.29540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7c01 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.910 | 48.910 | 3.360 |
High resolution limit [Å] | 3.200 | 10.610 | 3.200 |
Rmerge | 0.182 | 0.037 | 0.685 |
Rmeas | 0.214 | 0.045 | 0.806 |
Rpim | 0.110 | 0.024 | 0.417 |
Total number of observations | 114117 | 3107 | 14949 |
Number of reflections | 33348 | 963 | 4372 |
<I/σ(I)> | 5.7 | 18.3 | 1.6 |
Completeness [%] | 99.3 | 96.2 | 99.3 |
Redundancy | 3.4 | 3.2 | 3.4 |
CC(1/2) | 0.983 | 0.995 | 0.447 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293.15 | 2.0 M Ammonia sulfate, 0.1M sodium acetate pH 4.6 |