7VO4
Pimaricin type I PKS thioesterase domain (apo Pim TE)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-01-08 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97852 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.946, 58.867, 85.043 |
Unit cell angles | 90.00, 101.07, 90.00 |
Refinement procedure
Resolution | 83.460 - 2.100 |
R-factor | 0.2064 |
Rwork | 0.204 |
R-free | 0.25030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2h7x |
RMSD bond length | 0.018 |
RMSD bond angle | 1.870 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 83.460 | 9.900 | 2.140 |
High resolution limit [Å] | 2.100 | 5.700 | 2.100 |
Rmerge | 0.067 | 0.032 | 0.460 |
Rmeas | 0.080 | 0.039 | 0.557 |
Rpim | 0.043 | 0.021 | 0.309 |
Number of reflections | 29474 | 1531 | 1426 |
<I/σ(I)> | 6.8 | 0.771 | |
Completeness [%] | 99.2 | 98.8 | 95.8 |
Redundancy | 3.3 | 3.3 | 2.9 |
CC(1/2) | 0.997 | 0.771 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293.15 | 0.1M HEPES pH 7.5, 18%-25% w/v Polyethylene glycol 6000, 5% v/v (+/-)-2-Methyl-2,4-pentanediol |