7VKQ
Crystal structure of D. melanogaster SAMTOR in the SAH bound form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-05-17 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 |
Unit cell lengths | 49.934, 63.992, 80.268 |
Unit cell angles | 90.26, 93.38, 96.79 |
Refinement procedure
Resolution | 41.022 - 2.094 |
R-factor | 0.1676 |
Rwork | 0.166 |
R-free | 0.20620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7vkk |
RMSD bond length | 0.007 |
RMSD bond angle | 0.940 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.490 | 2.140 |
High resolution limit [Å] | 2.090 | 2.090 |
Rmerge | 0.105 | 0.540 |
Number of reflections | 54989 | 4909 |
<I/σ(I)> | 6.1 | 1.7 |
Completeness [%] | 94.8 | 78.5 |
Redundancy | 2 | |
CC(1/2) | 0.993 | 0.678 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 5 | 290 | 0.1 M sodium citrate, pH 5.0, and 20% (w/v) PEG 8,000. |