7VKM
Crystal structure of TrkA (G595R) kinase domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | H 3 2 |
Unit cell lengths | 105.423, 105.423, 203.741 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.690 - 2.550 |
R-factor | 0.20184 |
Rwork | 0.199 |
R-free | 0.25717 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4yne |
RMSD bond length | 0.008 |
RMSD bond angle | 1.539 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.590 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.071 | 0.456 |
Number of reflections | 14516 | 710 |
<I/σ(I)> | 38.25 | |
Completeness [%] | 100.0 | |
Redundancy | 13.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 3.0M NaCl, 0.1M Bis-Tris pH 6.5 |