7UVJ
Rationally Designed ED1 Epitope-Scaffold Immunogen for SARS-CoV-2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-29 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.54184 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.060, 95.631, 40.916 |
Unit cell angles | 90.00, 108.58, 90.00 |
Refinement procedure
Resolution | 17.870 - 1.990 |
R-factor | 0.2678 |
Rwork | 0.263 |
R-free | 0.31160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1bz4 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.481 |
Data reduction software | CrysalisPro |
Data scaling software | CrysalisPro |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 95.630 | 2.060 |
High resolution limit [Å] | 1.990 | 1.990 |
Rmerge | 0.111 | 0.216 |
Rpim | 0.066 | 0.133 |
Number of reflections | 18932 | 1843 |
<I/σ(I)> | 4.87 | |
Completeness [%] | 97.0 | |
Redundancy | 3.8 | |
CC(1/2) | 0.989 | 0.902 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 300 | 0.2 M sodium formate, 20% w/v PEG3350 |