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7UCD

Transcription factor FosB/JunD bZIP domain covalently modified with the cysteine-targeting alpha-haloketone compound Z2159931480

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]80
Detector technologyPIXEL
Collection date2021-04-10
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)1.0
Spacegroup nameI 2 2 2
Unit cell lengths48.260, 67.670, 122.943
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.050 - 3.210
R-factor0.2845
Rwork0.280
R-free0.32970
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5vpf poly-alanine
RMSD bond length0.009
RMSD bond angle1.090
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1-4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.9232.779
High resolution limit [Å]2.4462.446
Rmerge0.2162.605
Rmeas0.2332.804
Rpim0.0851.019
Number of reflections3060191
<I/σ(I)>6.71.3
Completeness [%]84.972.7
Redundancy7.27
CC(1/2)0.9960.664
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293100 mM Tris HCl pH 7.0, 40% (v/v) Ethanol

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PDB entries from 2024-07-10

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