7U6P
Structure of an intellectual disability-associated ornithine decarboxylase variant G84R
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-06 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.806, 85.879, 154.738 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.464 - 2.350 |
R-factor | 0.1907 |
Rwork | 0.188 |
R-free | 0.22450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7s3f |
RMSD bond length | 0.003 |
RMSD bond angle | 0.653 |
Data reduction software | MOSFLM |
Data scaling software | pointless |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.600 | 2.430 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 1.350 | |
Number of reflections | 42293 | 4104 |
<I/σ(I)> | 8.5 | |
Completeness [%] | 99.9 | |
Redundancy | 9.4 | |
CC(1/2) | 0.993 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 278 | 0.2 M sodium acetate trihydrate pH 7.0, 20% w/v polyethylene glycol 3350 |