7U0R
Crystal structure of Methanomethylophilus alvus PylRS(N166A/V168A) complexed with meta-trifluoromethyl-2-benzylmalonate and AMP-PNP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.11583 |
Spacegroup name | I 4 |
Unit cell lengths | 108.958, 108.958, 112.260 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.370 - 1.800 |
R-factor | 0.1817 |
Rwork | 0.180 |
R-free | 0.21140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jp2 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.104 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.370 | 1.867 |
High resolution limit [Å] | 1.800 | 1.803 |
Number of reflections | 57972 | 4659 |
<I/σ(I)> | 18.75 | |
Completeness [%] | 95.0 | 66.69 |
Redundancy | 1.997 | |
CC(1/2) | 1.000 | 0.106 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 291.15 | 10 mM Tris-HCl pH 7.4, 26% polyethylene glycol 3350, 100 mM meta-trifluoromethyl-2-benzylmalonate |