7U0C
Crystal structure of broadly neutralizing antibody HEPC3.4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | H 3 2 |
Unit cell lengths | 263.790, 263.790, 207.089 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 79.696 - 3.300 |
R-factor | 0.2168 |
Rwork | 0.215 |
R-free | 0.26030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6med |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.7.2) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 79.700 | 79.700 | 3.430 |
High resolution limit [Å] | 3.300 | 11.900 | 3.300 |
Rmerge | 0.136 | 0.049 | 2.551 |
Rmeas | 0.144 | 0.052 | 2.757 |
Rpim | 0.048 | 0.018 | 0.991 |
Total number of observations | 386081 | 8199 | 42401 |
Number of reflections | 41569 | 953 | 4683 |
<I/σ(I)> | 10.1 | 33.4 | 1 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 9.3 | 8.6 | 9.1 |
CC(1/2) | 0.880 | 0.998 | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 3.0 M sodium formate, sodium acetate trihydrate pH 4.6 |