7TYD
Crystal structure of FGFR4 domain 3 in complex with a de novo-designed mini-binder in P21 space group
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979180 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.798, 58.664, 68.055 |
Unit cell angles | 90.00, 110.93, 90.00 |
Refinement procedure
Resolution | 49.320 - 2.860 |
R-factor | 0.2704 |
Rwork | 0.268 |
R-free | 0.30630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1cvs |
RMSD bond length | 0.003 |
RMSD bond angle | 0.546 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.900 |
High resolution limit [Å] | 2.850 | 2.850 |
Number of reflections | 8780 | 412 |
<I/σ(I)> | 18.55 | 2.564 |
Completeness [%] | 96.1 | 87.3 |
Redundancy | 4.9 | 4.1 |
CC(1/2) | 0.992 | 0.889 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 277 | 0.1 M Bis-Tris (pH 5.5) 25% polyethylene glycol 3,350 3% 1,5-diaminopentane dihydrochloride |