7TV0
Crystal structure of BRD4 bromodomain 1 in complex with dual-acetylated SARS-CoV-2 E
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-01-14 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.320, 96.220, 78.950 |
Unit cell angles | 90.00, 94.37, 90.00 |
Refinement procedure
Resolution | 34.390 - 2.600 |
R-factor | 0.2472 |
Rwork | 0.243 |
R-free | 0.29220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3uvw |
RMSD bond length | 0.004 |
RMSD bond angle | 0.730 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.100 | 48.100 | 2.600 |
High resolution limit [Å] | 2.500 | 9.010 | 2.500 |
Rmerge | 0.159 | 0.061 | 0.867 |
Rmeas | 0.198 | 0.077 | 1.135 |
Rpim | 0.116 | 0.046 | 0.722 |
Total number of observations | 66996 | 1313 | 5006 |
Number of reflections | 24678 | 530 | 2546 |
<I/σ(I)> | 5.6 | 12.3 | 1.2 |
Completeness [%] | 96.9 | 93.7 | 89.3 |
Redundancy | 2.7 | 2.5 | 2 |
CC(1/2) | 0.974 | 0.989 | 0.392 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 1.5 M ammonium sulfate, 0.1 mM Tris, pH 8.5, 12% glycerol |