7TOW
Antibody DH1058 Fab fragment bound to SARS-CoV-2 fusion peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.916, 76.788, 119.786 |
Unit cell angles | 90.00, 100.85, 90.00 |
Refinement procedure
Resolution | 39.210 - 2.150 |
R-factor | 0.1696 |
Rwork | 0.167 |
R-free | 0.23370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ggu |
RMSD bond length | 0.007 |
RMSD bond angle | 0.943 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.210 | 2.230 |
High resolution limit [Å] | 2.150 | 2.150 |
Rpim | 0.115 | |
Number of reflections | 48438 | 4817 |
<I/σ(I)> | 22.5 | 5.4 |
Completeness [%] | 92.9 | |
Redundancy | 5.59 | |
CC(1/2) | 0.993 | 0.960 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 20% PEG3000, 100mM Tris base/HCl pH 7.0, 200mM calcium acetate |